Create new track from existing track

 You can create a new track from the data of existing tracks. This document describes how to create a new track from the data of existing track.
  1. Please right-click the label of the track and click [Create New Track] in the popup menu.

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  2. GenomeJack displays the Create New Track dialog.

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  3. Please click [Edit] of Add Reference if you want add annotation information to track. GenomeJack displays the Create New Features dialog. Please click [Add Reference].

    createNewTrackReferenceList1_jpg

  4. GenomeJack displays the Add dialog. Please click [OK] after finishing the settings.

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    Reference Feature select track which has annotation information.
    Property Name select the property of annotation information.
    Condition set conditions to be consistent feature.

    Conditions you can set is defined in the following table.

    Exact Match give an annotation information whose start and end position is equivalent to that of the track you selected.
    Loose Match give an annotation information whose range is the nearest from that you set (upstream “X” from start and downstream “Y” from end).
    Contain give an annotation information which has the broadest range between start and end position.
    Loose Contain give an annotation information which has the broadest range in that you set (upstream “X” from start and downstream “Y” from end).
    Upstream give an annotation information which has the broadest range between start and upstream “X” from that.
    Downstream give an annotation information which has the broadest range between end and downstream “X” from that.
    Promoter give an annotation information which has the broadest range between upstream “X” and “Y” from start.

  5. Please click [OK] of the Create New Features dialog.

    createNewTrackReferenceList2_jpg

  6. Add Reference has been renovated settings.

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  7. Please click [Edit] of Filter, if you want add filtering settings. GenomeJack displays the Set Feature Filter dialog. Please click [OK] after finishing the settings.

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  8. Filter has been renovated settings.

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  9. Please click [OK]. A new track has been created.

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